The detailed information of tRNA gene sequence


Sequence ID>WENV170971550
Genome IDMTKX01007443
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 723
End posion on genome 630
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catgaggcgc
tRNA gene sequence 
GGAGAGATGTCTGAGAGGCCGAAGGAGCACGACTGGAAATCGTGTGTACGCCCACAAAGG
TGTACCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
tnntcgaaat
Secondary structure (Cloverleaf model)
>WENV170971550	Ser	GGA
                   c      GCCA tnntcgaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G T C T       G C G G G     C
    G         + | |                 T T
    C       A G G A
      C G A        G     TGTACGCCCACAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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