The detailed information of tRNA gene sequence


Sequence ID>WENV170971565
Genome IDMTKX01007579
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 45544
End posion on genome 45469
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttcgcgcgc
tRNA gene sequence 
AGGTCCGTGGCTCAATTGGCAGAGCACCGGTCTCCAAAACCGGGGGTTGCAGGTTCGAGT
CCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
ttatattcac
Secondary structure (Cloverleaf model)
>WENV170971565	Trp	CCA
                   c      GCCA ttatattcac
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T A A        G      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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