The detailed information of tRNA gene sequence


Sequence ID>WENV170971572
Genome IDMTKX01007745
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 14257
End posion on genome 14328
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
attgacctac
tRNA gene sequence 
GGGCGATTAACTCAGCGGTAGAGTGCTACCTTCACACGGTAGAAGTCAGAGGTTCAAGTC
CTCTATCGCCCAttc
Downstream region at tRNA end position 
ctccctcctc
Secondary structure (Cloverleaf model)
>WENV170971572	Val	CAC
                   c      Attc ctccctcctc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T C T C C     A
        G A        A      | | | | |     A
      C     C T C A       A G A G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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