The detailed information of tRNA gene sequence


Sequence ID>WENV170971599
Genome IDMTKX01008110
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3228
End posion on genome 3302
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ctccattcac
tRNA gene sequence 
ATCCTCATAGTTCAAAGGATAGAATAGAAGTTTCCTAAGCTTTTGATAACAGTTCAAGTC
TGTTTGAGGATACCA
Downstream region at tRNA end position 
tttatcccgg
Secondary structure (Cloverleaf model)
>WENV170971599	Arg	CCT
                   c      ACCA tttatcccgg
                     A - T
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T T G T C     A
      A A A        A      | | | | |     A
    G       C T T G       A A C A G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     TGAT
                    G + T
                    A - T
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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