The detailed information of tRNA gene sequence


Sequence ID>WENV170971604
Genome IDMTKX01008272
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2868
End posion on genome 2792
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagaaaagt
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGTTAGAGCATCGGAATCATAATCCGCAGGTCCGGGGTTCAAA
TCCCTGCGCCGCTACCA
Downstream region at tRNA end position 
aaattctttt
Secondary structure (Cloverleaf model)
>WENV170971604	Met	CAT
                   t      ACCA aaattctttt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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