The detailed information of tRNA gene sequence


Sequence ID>WENV170971617
Genome IDMTKX01008512
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 28
End posion on genome 105
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gcaaaaaatT
tRNA gene sequence 
CGGGGTGTGGCGCAGTTGGCTAGCGCACTTGCATGGGGTGCAAGGGGTCGTCCGTTCGAG
TCGGATCACCCCCGACA
Downstream region at tRNA end position 
aaaaaggggc
Secondary structure (Cloverleaf model)
>WENV170971617	Pro	GGG
                   T      GACA aaaaaggggc
                     C   C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A G G C     A
      T G A        G      + | | | |     G
    T       C G C G       G T C C G     C
    G       | | | |                 T T
    G       G C G C
      C T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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