The detailed information of tRNA gene sequence


Sequence ID>WENV170971621
Genome IDMTKX01008542
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12137
End posion on genome 12230
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttctgccat
tRNA gene sequence 
GGAGAGGTGACCGAGTCGGCCGAAGGTGCTCGCCTGCTAAGCGAGTGTTCCGCTATAAAC
GGGACCCAGGGTTCAAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
tgtgaattcc
Secondary structure (Cloverleaf model)
>WENV170971621	Ser	GCT
                   t      GCCA tgtgaattcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
    C T G A        G      | | | | |     A
  G         G C C A       C A G G G     C
  G           | | |                 T T
  C         A G G T
    C G A          G     TGTTCCGCTATAAACGGGACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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