The detailed information of tRNA gene sequence


Sequence ID>WENV170971636
Genome IDMTKX01008855
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8250
End posion on genome 8343
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacttgacac
tRNA gene sequence 
GGAGAGATGTCCGAGAGGCTGAAGGAGCACGACTGGAAATCGTGTGTCCCGTCACAAAGC
GGGACCCAGGGTTCAAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gttatatctt
Secondary structure (Cloverleaf model)
>WENV170971636	Ser	GGA
                   c      GCCA gttatatctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      A G A        G      | | | | |     A
    G       G C C T       C A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTCCCGTCACAAAGCGGGACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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