The detailed information of tRNA gene sequence


Sequence ID>WENV170971657
Genome IDMTKX01009176
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 230
End posion on genome 154
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
accggctcac
tRNA gene sequence 
GCACCCGTAGCTCAACTGGATAGAGCATCGGTCTTCGGAACCGAGGGTTGGGGGTTCGAG
CCCCTCCGGGTGCGCCA
Downstream region at tRNA end position 
atattttcaa
Secondary structure (Cloverleaf model)
>WENV170971657	Arg	TCG
                   c      GCCA atattttcaa
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          C G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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