The detailed information of tRNA gene sequence


Sequence ID>WENV170971662
Genome IDMTKX01009329
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 95
End posion on genome 20
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctttttttc
tRNA gene sequence 
GGCGGTGTAGCTCAGTGGTCAGAGCAGCGGCTTCATAAGCCGTGTGTCGTAGGTTCAAAT
CCCACCACCGCTACAA
Downstream region at tRNA end position 
aggaagcagt
Secondary structure (Cloverleaf model)
>WENV170971662	Met	CAT
                   c      ACAA aggaagcagt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | |   | |     A
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     GTGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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