The detailed information of tRNA gene sequence


Sequence ID>WENV170971673
Genome IDMTKX01009433
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1294
End posion on genome 1367
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tagtcctagc
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCCTTACACGGCGGAGGTCAGGAGTTCGAA
TCTCCTCGAGCCCAtct
Downstream region at tRNA end position 
gtgtggtttt
Secondary structure (Cloverleaf model)
>WENV170971673	Val	TAC
                   c      Atct gtgtggtttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C C T C     A
      C G A        G      | | | | |     G
    T       T C T G       A G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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