The detailed information of tRNA gene sequence


Sequence ID>WENV170971675
Genome IDMTKX01009490
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 899
End posion on genome 988
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgtcctcagc
tRNA gene sequence 
GGAGAGTTGCCAGAGCGGACGAATGGGACGGTCTCGAAAACCGTTGAGCACGCAAGTGTT
CCAAGGGTTCAAATCCCTTACTCTCCGCCA
Downstream region at tRNA end position 
ttcgcagccc
Secondary structure (Cloverleaf model)
>WENV170971675	Ser	CGA
                   c      GCCA ttcgcagccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      C G A        G      | | | | |     A
    G       G A C C       A A G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGAGCACGCAAGTGTTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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