The detailed information of tRNA gene sequence


Sequence ID>WENV170971676
Genome IDMTKX01009516
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10380
End posion on genome 10307
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gtcctcgctc
tRNA gene sequence 
GCCCCCGTAGCTCAATGGATAGAGTACCTGACTTCGAATCAGTCGGTTGCGTGTTCGAAT
CACGCCGGGGGCACtt
Downstream region at tRNA end position 
ccttcgtcat
Secondary structure (Cloverleaf model)
>WENV170971676	Arg	TCG
                   c      ACtt ccttcgtcat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C A C     A
      T A A        A      | | | | |     G
    G       C T C G       G C G T G     C
    G       | | | +                 T T
    A       G A G T
      T A          A     CGGTT
                    C   T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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