The detailed information of tRNA gene sequence


Sequence ID>WENV170971683
Genome IDMTKX01009701
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 185
End posion on genome 112
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatttggca
tRNA gene sequence 
TGCGAGGTGGTGCAATGGTAGCATTTGGGTTTCATAAGCCTTAGATGAGGGTTCGATTCC
CTCCCTCGCAACAA
Downstream region at tRNA end position 
aggatgaagc
Secondary structure (Cloverleaf model)
>WENV170971683	Met	CAT
                   a      ACAA aggatgaagc
                     T - A
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     C T C C C     A
        A A        G      | | | | |     G
      T     C G T G       G A G G G     C
      G     | | | +                 T T
      G     G C A T
        T A        T     AGAT
                    T   T
                    G + T
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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