The detailed information of tRNA gene sequence


Sequence ID>WENV170971698
Genome IDMTKX01009951
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 47481
End posion on genome 47385
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tattaccgtc
tRNA gene sequence 
GGAGGCGAGTGTGCTCTGGTGAGTGCCCCGGGCTTCAAACCCGGTGGGGGTCGGTACGGC
CGGCTCCGGTGGGTTCGATTCCCACACGTCTCCGCCA
Downstream region at tRNA end position 
ttttttgttt
Secondary structure (Cloverleaf model)
>WENV170971698	SeC	TCA
                   c      GCCA ttttttgttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     C - G
                     G - C
                     A   A          T T
                    G     C A C C C     A
      T C T        T      | | | | |     G
    G       C G T G       G T G G G     C
    G       | + + |                 T T
    T       G T G C
      G A          C     TGGGGGTCGGTACGGCCGGCTCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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