The detailed information of tRNA gene sequence


Sequence ID>WENV170971703
Genome IDMTKX01010168
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6366
End posion on genome 6289
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gccatacgtt
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCCGTAGGTTCGA
GCCCTATCGCGCCCACAA
Downstream region at tRNA end position 
aatgagctgg
Secondary structure (Cloverleaf model)
>WENV170971703	Val	CAC
                   t      ACAA aatgagctgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C G
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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