The detailed information of tRNA gene sequence


Sequence ID>WENV170971705
Genome IDMTKX01010205
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 164
End posion on genome 75
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctaacaagtt
tRNA gene sequence 
GGAGAGATGCCTGAGTGGTTGAAAGGGGCACCCTGCTAAGGTGTTAGTCGTGTAAGCGGC
TCGAGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
catcgtgcta
Secondary structure (Cloverleaf model)
>WENV170971705	Ser	GCT
                   t      GCAA catcgtgcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G         | | |                 T T
    T       A A G G
      T G A        G     TAGTCGTGTAAGCGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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