The detailed information of tRNA gene sequence


Sequence ID>WENV170971728
Genome IDMTKX01010887
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 607
End posion on genome 532
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttcttgttgt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCTTGACTGGCAGTCAAGAGGTCAGGAGTTCGATC
CTCCTCGGCTCCACCA
Downstream region at tRNA end position 
ttcaaaaacc
Secondary structure (Cloverleaf model)
>WENV170971728	Ala	GGC
                   t      ACCA ttcaaaaacc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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