The detailed information of tRNA gene sequence


Sequence ID>WENV170971729
Genome IDMTKX01010914
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 382
End posion on genome 292
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcacaatttc
tRNA gene sequence 
GGAGAGATGCCAGAGTGGTTGATTGGGACGGTCTCGAAAACCGTTATGGTCCTTGTGGCC
ATCGTGGGTTCGAACCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gcagcgttct
Secondary structure (Cloverleaf model)
>WENV170971729	Ser	CGA
                   c      GCCA gcagcgttct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          C A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       + | | |                 T T
    T       T T G G
      T G A        G     TATGGTCCTTGTGGCCATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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