The detailed information of tRNA gene sequence


Sequence ID>WENV170971735
Genome IDMTKX01011029
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 389
End posion on genome 461
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgtttcggcc
tRNA gene sequence 
GGGGCTGTAGCTCAATGGGAAGAGCGCCGGTTTTGCACGCCGGAGGTCGCCGGTTCGAGC
CCGGTCAGCTCCAttg
Downstream region at tRNA end position 
aaaaaaattt
Secondary structure (Cloverleaf model)
>WENV170971735	Ala	TGC
                   c      Attg aaaaaaattt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T G G C C     A
      T A A        A      + | | | |     G
    G       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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