The detailed information of tRNA gene sequence


Sequence ID>WENV170971738
Genome IDMTKX01011096
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11180
End posion on genome 11254
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cttactaatg
tRNA gene sequence 
GTGGCTGTAGCTCAAAGGTAGAGTACCTGACTGTGGATCAGGGTGTTGCGGGTTCGAGCC
CCGTCAGCCACCCCA
Downstream region at tRNA end position 
ctgtgcaatt
Secondary structure (Cloverleaf model)
>WENV170971738	His	GTG
                   g      CCCA ctgtgcaatt
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T G C C C     A
        A A        A      + | | | |     G
      A     C T C G       G C G G G     C
      G     | | | +                 T T
      G     G A G T
        T A        A     GTGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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