The detailed information of tRNA gene sequence


Sequence ID>WENV170971744
Genome IDMTKX01011275
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 864
End posion on genome 789
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaattagg
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGTAGAGCTACCGGCTCATAACCGGTTGGTCGGGGGTTCGAAT
CCCTCTGGGCCCACCA
Downstream region at tRNA end position 
ttttttctcc
Secondary structure (Cloverleaf model)
>WENV170971744	Met	CAT
                   g      ACCA ttttttctcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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