The detailed information of tRNA gene sequence


Sequence ID>WENV170971755
Genome IDMTKX01011481
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4502
End posion on genome 4427
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ggcattacgt
tRNA gene sequence 
GGGGCTGTAGCGCAGCTGGGAGCGCGTCTCAATGGCATTGAGAAGGTCAGGGGTTCGAGT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
aacagtcagg
Secondary structure (Cloverleaf model)
>WENV170971755	Ala	GGC
                   t      ACCA aacagtcagg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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