The detailed information of tRNA gene sequence


Sequence ID>WENV170971771
Genome IDMTKX01011719
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 603
End posion on genome 511
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atatctacta
tRNA gene sequence 
GGAGAAGTCGCCTAGCCTGGTCGAGGGCGCACGACTGGAAATCGTGTAAACCCCAAAAGG
GTTTCGAGAGTTCGAATCTCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tataaggacg
Secondary structure (Cloverleaf model)
>WENV170971771	Ser	GGA
                   a      GCCA tataaggacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C T C     A
    C C G A        C      | | | | |     G
  T         T C C G       G A G A G     C
  G         + | | |                 T T
  G         G G G C
    T C G A        G     TAAACCCCAAAAGGGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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