The detailed information of tRNA gene sequence


Sequence ID>WENV170971779
Genome IDMTKX01011989
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5025
End posion on genome 5097
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgttccaacg
tRNA gene sequence 
GGGCCCGTAGCTCAGTGGCAGAGCAGGCGGCTCATAACCGCTTGGTTGAAGGTTCGAATC
CTTCCGGGCCCACac
Downstream region at tRNA end position 
agttataaat
Secondary structure (Cloverleaf model)
>WENV170971779	Met	CAT
                   g      ACac agttataaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T T C C     A
        G A        A      | | | | |     G
      T     C T C G       G A A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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