The detailed information of tRNA gene sequence


Sequence ID>WENV170971795
Genome IDMTKX01012492
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 133
End posion on genome 46
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaacaattt
tRNA gene sequence 
GGAGGGGTCGGATAGTGGTTCATTCCACAGACCTGGAAAGTCTGCGGCTCACAAGGCCTC
GCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
taattcaaat
Secondary structure (Cloverleaf model)
>WENV170971795	Ser	GGA
                   t      GCCA taattcaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T A G G       G C G G G     C
    G         | | |                 T T
    T       T T C C
      T C A        A     CGGCTCACAAGGCCTC
                    C - G
                    A - T
                    G - C
                    A - T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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