The detailed information of tRNA gene sequence


Sequence ID>WENV170971801
Genome IDMTKX01012604
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2445
End posion on genome 2520
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
agcgatcgtc
tRNA gene sequence 
GGGCCTGTAGCGCAGTTGGGAGCGCGCTTCAATCGCACTGAAGAGGTCGAGGGTTCGAAT
CCCTCCAGGTCCATCA
Downstream region at tRNA end position 
tgagccggga
Secondary structure (Cloverleaf model)
>WENV170971801	Ala	CGC
                   c      ATCA tgagccggga
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    T       C G C G       G A G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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