The detailed information of tRNA gene sequence


Sequence ID>WENV170971808
Genome IDMTKX01012819
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5617
End posion on genome 5691
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tattttgttt
tRNA gene sequence 
GGCCCCATAGGACAACGGCTAGTCCATCGGATTCTCAGTCCGAGGATCGGGGTTCGATTC
CCCGTGGGGCTGCCA
Downstream region at tRNA end position 
agcggtataa
Secondary structure (Cloverleaf model)
>WENV170971808	Glu	CTC
                   t      GCCA agcggtataa
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      C A A        A      | | | | |     G
    G       C A G G       C G G G G     C
    G       | | | |                 T T
    C       G T C C
      T A          A     GGAT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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