The detailed information of tRNA gene sequence


Sequence ID>WENV170971827
Genome IDMTKX01013310
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2980
End posion on genome 2905
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaataaatat
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCACTTGCCTTGCACGCAAGGGGTCAGGAGTTCGATC
CTCCTCATCTCCACCA
Downstream region at tRNA end position 
tgtttgtact
Secondary structure (Cloverleaf model)
>WENV170971827	Ala	TGC
                   t      ACCA tgtttgtact
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          C T
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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