The detailed information of tRNA gene sequence


Sequence ID>WENV170971848
Genome IDMTKX01013661
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 179162
End posion on genome 179251
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctgcttcgc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTGATGGCGACGGTCTTGAAAACCGCTGTGGCTGCATAGTCA
CCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
ttctgcaagt
Secondary structure (Cloverleaf model)
>WENV170971848	Ser	TGA
                   c      GCCA ttctgcaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    T       T G G C
      T G A        G     TGTGGCTGCATAGTCACC
                    A   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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