The detailed information of tRNA gene sequence


Sequence ID>WENV170971849
Genome IDMTKX01013661
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 179319
End posion on genome 179412
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actggcacca
tRNA gene sequence 
GGGGAGGTGCCGGAGTGGTCGATCGGGGCCGCCTGCTAAGCGGTTGAGGGACTGATGAGT
TCCTCCCAGGGTTCGAATCCCTGCCTCCCCGCCT
Downstream region at tRNA end position 
ttgagccctt
Secondary structure (Cloverleaf model)
>WENV170971849	Ser	GCT
                   a      GCCT ttgagccctt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGAGGGACTGATGAGTTCCTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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