The detailed information of tRNA gene sequence


Sequence ID>WENV170971867
Genome IDMTKX01013955
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12557
End posion on genome 12632
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cagtttatat
tRNA gene sequence 
GGGCCCATAGCGCAGTTGGGAGCGCGTCTCAATGGCATTGAGAAGGCCGAGGGTTCGAAT
CCCTCTGGGTCCACAA
Downstream region at tRNA end position 
acaaaagcca
Secondary structure (Cloverleaf model)
>WENV170971867	Ala	GGC
                   t      ACAA acaaaagcca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    T       C G C G       G A G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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