The detailed information of tRNA gene sequence


Sequence ID>WENV170971892
Genome IDMTKX01014619
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1546
End posion on genome 1470
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
acgtgtgcag
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTTAGAGCGTCGCGTTGACATCGCGGAGGCCGTAGGTTCGAG
CCCTATACCGCCCACCA
Downstream region at tRNA end position 
ccacccgccg
Secondary structure (Cloverleaf model)
>WENV170971892	Val	GAC
                   g      ACCA ccacccgccg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C G
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T + G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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