The detailed information of tRNA gene sequence


Sequence ID>WENV170971893
Genome IDMTKX01014637
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 18
End posion on genome 94
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gaatgtccaT
tRNA gene sequence 
GGGCGCGTAGCTCAGCTGGTTAGAGCGCACGGTTCACATCCGTGAGGTTCGGAGGTTCGA
GCCCTCTCGCGCCCATtt
Downstream region at tRNA end position 
tcttttaaag
Secondary structure (Cloverleaf model)
>WENV170971893	Val	CAC
                   T      ATtt tcttttaaag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C G
                    T     T C T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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