The detailed information of tRNA gene sequence


Sequence ID>WENV170971932
Genome IDMTKX01015765
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 936
End posion on genome 1012
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattaagcat
tRNA gene sequence 
GGCGGCGTAGCTCAGGTGGCTAGAGCATGCGGTTCATACCCGCAGTGTCAGCGGTTCAAA
TCCGTTCGCCGCTACTA
Downstream region at tRNA end position 
cgaggcccta
Secondary structure (Cloverleaf model)
>WENV170971932	Met	CAT
                   t      ACTA cgaggcccta
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T G C C     A
      G G A        A      | + | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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