The detailed information of tRNA gene sequence


Sequence ID>WENV170971946
Genome IDMTKX01016181
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 585
End posion on genome 509
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaggtaagat
tRNA gene sequence 
CGCGGGGTGGAGCAGCTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCAGAGGTTCAAA
TCCTCTCCCCGCTACCA
Downstream region at tRNA end position 
aatattttca
Secondary structure (Cloverleaf model)
>WENV170971946	Met	CAT
                   t      ACCA aatattttca
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      C G A        G      | | | | |     A
    T       C G A G       A G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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