The detailed information of tRNA gene sequence


Sequence ID>WENV170971954
Genome IDMTKX01016335
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2118
End posion on genome 2021
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttttcttgaa
tRNA gene sequence 
GGAAGTGCCAAGGTCACTGGTGGGCCTCCTGGACTTCAAATCCAGTGTGGGGCGCTAGAA
CCGTCCCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
atttattagc
Secondary structure (Cloverleaf model)
>WENV170971954	SeC(p)	TCA
                   a      GCCA atttattagc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGTGGGGCGCTAGAACCGTCCCAG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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