The detailed information of tRNA gene sequence


Sequence ID>WENV170971985
Genome IDMTKX01016987
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 977
End posion on genome 888
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accgacatct
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGACGAATGGGGCCGCCTGCTAAGTGGTTGTTGGAGTAAAATCC
AACCGAGGGTTCGAATCCCTCCCTCCCCGCtc
Downstream region at tRNA end position 
ttttaacgat
Secondary structure (Cloverleaf model)
>WENV170971985	Ser	GCT
                   t      GCtc ttttaacgat
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTTGGAGTAAAATCCAACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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