The detailed information of tRNA gene sequence


Sequence ID>WENV170971993
Genome IDMTKX01017310
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 56
End posion on genome 131
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
acggcgcctt
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGGAGAGCGCGGGCTTTGCAAGCCTGAGGCCGTCGGTTCGATC
CCGATCATCTCCACCA
Downstream region at tRNA end position 
gcggcgctgc
Secondary structure (Cloverleaf model)
>WENV170971993	Ala	TGC
                   t      ACCA gcggcgctgc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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