The detailed information of tRNA gene sequence


Sequence ID>WENV170972021
Genome IDMTKX01017986
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5335
End posion on genome 5406
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agcgcctatt
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCTACGCAAATGCCTGCAGAGCATTACCACTCCGGTTCGAATC
CGGACCTTGGCTttc
Downstream region at tRNA end position 
tttaatttga
Secondary structure (Cloverleaf model)
>WENV170972021	Cys	GCA
                   t      Tttc tttaatttga
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     ACCAC
                    A - T
                    A - T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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