The detailed information of tRNA gene sequence


Sequence ID>WENV170972027
Genome IDMTKX01018156
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 410
End posion on genome 482
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aagtaaattc
tRNA gene sequence 
GCCGACGTAGCTCAATCGGCAGAGCAACCGCCTTGTAAGTGGTAGGTTACGGGTTCGATT
CCCGTCGTCGGCTtcc
Downstream region at tRNA end position 
atgccagtcg
Secondary structure (Cloverleaf model)
>WENV170972027	Thr	TGT
                   c      Ttcc atgccagtcg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     T G C C C     A
      T A A        A      | | | | |     G
    C       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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