The detailed information of tRNA gene sequence


Sequence ID>WENV170972037
Genome IDMTKX01018347
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 26581
End posion on genome 26494
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gattgccgtc
tRNA gene sequence 
GGAGGGCTGGCCGAGTGGTCGAAGGCGGCTGACTTGAAATCAGCAGGGGCGCAAGTCTCC
AGGGGTTCGAATCCTCTGCCCTCCGCCA
Downstream region at tRNA end position 
gtttttggtt
Secondary structure (Cloverleaf model)
>WENV170972037	Ser	TGA
                   c      GCCA gtttttggtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     T C T C C     A
      T G A        G      | | + | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     AGGGGCGCAAGTCTCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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