The detailed information of tRNA gene sequence


Sequence ID>WENV170972057
Genome IDMTKX01018816
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 399
End posion on genome 491
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agatgaatac
tRNA gene sequence 
GGAGAGATGCCCGAGAGGCCGAAGGGGCACGATTGGAAATCGTGTGTGCCGCTAATACCG
GTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cgtgaaggcc
Secondary structure (Cloverleaf model)
>WENV170972057	Ser	GGA
                   c      GCCA cgtgaaggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TGTGCCGCTAATACCGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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