The detailed information of tRNA gene sequence


Sequence ID>WENV170972092
Genome IDMTKX01019870
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2637
End posion on genome 2711
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcggtcgctt
tRNA gene sequence 
GGCGAGGTAGCTCAGTGGGAGAGCAGGGGACTCATAAGCCCTTGGTCGTGAGTTCAACCC
TCACCCTCGCCACCA
Downstream region at tRNA end position 
taatccgccg
Secondary structure (Cloverleaf model)
>WENV170972092	Met	CAT
                   t      ACCA taatccgccg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          C C
                    T     C A C T C     A
        G A        A      | | | | |     A
      T     C T C G       G T G A G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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