The detailed information of tRNA gene sequence


Sequence ID>WENV170972104
Genome IDMTKX01020056
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2328
End posion on genome 2413
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcccgccccc
tRNA gene sequence 
GGAGGGATGGCAGAGTGGTCTATTGCGGCGGTCTTGAAAACCGTTGGCCGTGAGGCCCGC
AGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
cgacttgcgg
Secondary structure (Cloverleaf model)
>WENV170972104	Ser	TGA
                   c      GCCA cgacttgcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G A C G       G C A G G     C
    G       + | | |                 T T
    T       T T G C
      C T A        G     TGGCCGTGAGGCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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