The detailed information of tRNA gene sequence


Sequence ID>WENV170972105
Genome IDMTKX01020056
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2428
End posion on genome 2519
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgcggacac
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGCTGATAGCACTGGATTGCTAATCCAGTAGGTGGGTTTACCTG
CCTCCCGGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
gacgacgcga
Secondary structure (Cloverleaf model)
>WENV170972105	Ser	GCT
                   c      GCCA gacgacgcga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C C G G G     C
    G       + | | |                 T T
    C       T A G C
      T G A        A     TAGGTGGGTTTACCTGCCTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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