The detailed information of tRNA gene sequence


Sequence ID>WENV170972110
Genome IDMTKX01020171
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2463
End posion on genome 2387
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatctttcaa
tRNA gene sequence 
GGTCTGGTAGTTCAGTTGGTTAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCCAGACCGCAA
Downstream region at tRNA end position 
aatccccgag
Secondary structure (Cloverleaf model)
>WENV170972110	Asp	GTC
                   a      GCAA aatccccgag
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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