The detailed information of tRNA gene sequence


Sequence ID>WENV170972123
Genome IDMTKX01020405
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4173
End posion on genome 4247
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tctttttaat
tRNA gene sequence 
GGCGCTATCGTCTAGTGGTTAGGACACCACGCTTTCAATGTGGTAACCGGAGTTCAATTC
TCCGTAGCGCTACCA
Downstream region at tRNA end position 
atcgttccaa
Secondary structure (Cloverleaf model)
>WENV170972123	Glu	TTC
                   t      ACCA atcgttccaa
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     G C C T C     A
      T G A        C      | | | | |     A
    G       T C T G       C G G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     TAAC
                    C - G
                    C - G
                    A - T
                    C - G
                    G + T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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