The detailed information of tRNA gene sequence


Sequence ID>WENV170972135
Genome IDMTKX01020879
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1824
End posion on genome 1731
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atttttttgg
tRNA gene sequence 
GGAGGTGGCTGGGGCCCGGTGGCTCCCGCGGTCTTCAAAACCGTTGTGCCGCTTCACGGC
GGCGGGTGGGTTCGACTCCCATGCACCTCCGCCA
Downstream region at tRNA end position 
ttttactgtt
Secondary structure (Cloverleaf model)
>WENV170972135	SeC(p)	TCA
                   g      GCCA ttttactgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    C     T A C C C     A
      C C C        T      + | | | |     G
    G       G G G G       G T G G G     C
    G       | + | |                 T T
    T       C T C C
      G G          C     TGTGCCGCTTCACGGCGGCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK