The detailed information of tRNA gene sequence


Sequence ID>WENV170972160
Genome IDMTKX01021363
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2701
End posion on genome 2787
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cggtttgagc
tRNA gene sequence 
GGAGGGATGTCCGAATTGGCAAGGGGCCGGTCTTGAAAACCGGTATGCCGCAAGGCTGTG
TGGGTTCGAGTCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
tttttattta
Secondary structure (Cloverleaf model)
>WENV170972160	Ser	TGA
                   c      GCCA tttttattta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       G T G G G     C
    G         | | +                 T T
    G       A G G G
      C A          G     TATGCCGCAAGGCTGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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